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DrSpike is offline DrSpike
Deity
Enthusiastic member of Apolyton
Sep 2001
time: 05:18
  Old Post 20-11-2004 15:24
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#31 Report this post to a moderator
Lose 30 kilos (of popups)

quote:
Originally posted by Skanky Burns

He has 360% of the points I do, but I have an infinite % more than you.


How will I sleep tonight?

vovan is offline vovan
Emperor

Oct 2001
time: 06:18
  Old Post 20-11-2004 22:28
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#32 Report this post to a moderator
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Woah. Man, this thing is so much more ... uhhh, difficult, than SETI@Home. Back when I tried that thing on my laptop, it was done in like four-five hours, one set of data. This thing has been running for 11 hours now, and it's only... ... 15% done. Even though my system's rating thingey is 110.

Zopperoni is offline Zopperoni
Emperor

Dec 2000
time: 06:18
  Old Post 21-11-2004 04:20
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#33 Report this post to a moderator
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I'm in, but I'm not going to bother checking it. It'll auto-pilot, right?

Asher is offline Asher
King
Calgary, Alberta
Nov 1999
time: 22:18
  Old Post 21-11-2004 06:18 Visit Asher's homepage!
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#34 Report this post to a moderator
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Yep, Zopper. It even updates the client on its own.

mrmitchell is offline mrmitchell
King

Donate to the Red Cross

Sep 2002
time: 23:18
  Old Post 21-11-2004 07:38
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#35 Report this post to a moderator
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I already run folding@home.

Is there a good reason I should switch? Aren't they doing the same thing (folding protein simulations)?

Asher is offline Asher
King
Calgary, Alberta
Nov 1999
time: 22:18
  Old Post 21-11-2004 08:56 Visit Asher's homepage!
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http://www.worldcommunitygrid.org/f...?thread=251#490
quote:

Folding@home and the Human Proteome folding project are VERY-VERY-VERY different.

Folding@home aims to get at the science of how a small number of proteins of KNOWN structure fold dynamically. Folding@home is a project to further understanding of the folding process itself. They use a technique termed "molecular dynamics".

The Human Proteome Folding Project (this project) will predict the structures of proteins of UNKNOWN-structure, lots of them, tons of them. The aim of this project is to get structures and functions for huge numbers of proteins so that biologists and biomedical researchers who run into these mystery proteins in their research can look to our database for functional/mechanistic clues about their favorite mystery-proteins.

Both projects are good stuff, one is for Physics peeps and one is for biologists…

For more info on all this stuff see our site (including pictures of proteins):

http://www.systemsbiology.org/Defau...e=humanproteome

EPW is offline EPW
King
California, USA
Jan 2004
time: 21:18
  Old Post 21-11-2004 09:05 Visit EPW's homepage!
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#37 Report this post to a moderator
Avatar Enlargement: We've got the solution

18% in 11 hours. Its really chugging along now!!!

Asher is offline Asher
King
Calgary, Alberta
Nov 1999
time: 22:18
  Old Post 21-11-2004 12:49 Visit Asher's homepage!
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#38 Report this post to a moderator
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A newwwww list.

The time it takes to complete a packet depends on the complexity of the protein. Some are very complex and take a lootttt of time.

Attachment: listagain.png
This has been downloaded 184 time(s).

vovan is offline vovan
Emperor

Oct 2001
time: 06:18
  Old Post 21-11-2004 13:02
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Hmmm, weird. At about 24hr mark and 40%, it just reset back to zero. I wonder what went wrong. Oh well.

Unspeakable Horror is offline Unspeakable Horror
Emperor

Oct 1999
time: 02:18
  Old Post 21-11-2004 19:06
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Mine didnīt complete anything AFAIK and it seems that started a new one 3hs ago (0.4%)

Zopperoni is offline Zopperoni
Emperor

Dec 2000
time: 06:18
  Old Post 21-11-2004 20:46
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#41 Report this post to a moderator
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I've been reassigned for the third time in eight hours; this is becoming tedious.

vovan is offline vovan
Emperor

Oct 2001
time: 06:18
  Old Post 21-11-2004 21:09
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Yup, mine just did it again. Quite unreliable this thing... Uninstalling it now.

Skanky Burns is offline Skanky Burns
Deity
Skanky Bastard Quartermaster
Aug 2001
time: 14:18
  Old Post 22-11-2004 04:04
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#43 Report this post to a moderator
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quote:
Originally posted by Asher
Yep, Zopper. It even updates the client on its own.


Ugh. No wonder I have to keep authorising its access to the internet each time it completes a packet. I leave my computer for a few days only to find it was sitting idle most of that time...

Asher is offline Asher
King
Calgary, Alberta
Nov 1999
time: 22:18
  Old Post 22-11-2004 08:01 Visit Asher's homepage!
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#44 Report this post to a moderator
Remove this text

quote:
Originally posted by Skanky Burns
Ugh. No wonder I have to keep authorising its access to the internet each time it completes a packet. I leave my computer for a few days only to find it was sitting idle most of that time...

As I said in the other thread, it looks like a ZoneAlarm bug.

The client hasn't been updated in about a month, before the Grid went live. And it hasn't been an issue on both of my computers with ZoneAlarm & the Grid on it.

Paddy the Scot is offline Paddy the Scot

Prince
Hordeland
Mar 2001
time: 14:18
  Old Post 22-11-2004 14:26 Visit Paddy the Scot<br><a href=/members><img src=/forums/images/inmate-icon.gif border=0></a><BR>'s homepage!
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#45 Report this post to a moderator
Tired of ads?

sounds like a great idea

will be interested in joining when it has settled a bit and seems to flow well

Zopperoni is offline Zopperoni
Emperor

Dec 2000
time: 06:18
  Old Post 23-11-2004 00:49
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#46 Report this post to a moderator
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I uninstalled it as well, I cannot make a valuable contribution if the program keeps restarting an assignment

Asher is offline Asher
King
Calgary, Alberta
Nov 1999
time: 22:18
  Old Post 23-11-2004 02:16 Visit Asher's homepage!
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#47 Report this post to a moderator
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The restarting is normal, and you get your points for them the next time you return a successful packet:
quote:
A "work unit" consists of various data including the protein sequence. The longer the sequence the "harder" it is to predict the fold. Longer sequence proteins take longer to process (sometimes much longer).

Due to the nature of the work, it's impossible to predict how long any specific work unit may take. i.e. it's non-determinsitic. That's really the beauty of putting this on a grid: it's a difficult computation problem.

Sometimes a work unit may not "converge" as we call it. This means it just hasn't found any way to fold this specific protein in a given amount of time and gives up. When it determines it can't converge it just stops working on it, sends it back (telling us it didn't converge) and you get a new work unit. However, it will try very, very hard before it gives up.

This would explain why you saw it processing for probably 4 hours and still be at 0.0%...then suddenly you saw it go to 0.4% and the CPU time went down. Points-wise, you should still get credit for the effort though.


Have some faith in that you really are helping to promote our understanding of the human proteome. If this was easy to do, we wouldn't have put it on the grid!
----------------------------------------
Rick Alther
World Community Grid Application Developer

MrWhereItsAt is offline MrWhereItsAt
Emperor
New Year's Resolution: 2005 is the year of Where It's At - come get some.
Nov 2001
time: 17:18
  Old Post 23-11-2004 13:25
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#48 Report this post to a moderator
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Silly people giving up because their computer's crunching gets nowhere within a few days/tries.

I know what research is like - signed up and joined.

AWESOME idea.

Paddy the Scot is offline Paddy the Scot

Prince
Hordeland
Mar 2001
time: 14:18
  Old Post 23-11-2004 13:36 Visit Paddy the Scot<br><a href=/members><img src=/forums/images/inmate-icon.gif border=0></a><BR>'s homepage!
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#49 Report this post to a moderator
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is this something that us dial-uper's can get into?

Unspeakable Horror is offline Unspeakable Horror
Emperor

Oct 1999
time: 02:18
  Old Post 23-11-2004 17:46
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#50 Report this post to a moderator
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I think you can, the installer asks what Inet connection you have.
The amount of data downloaded by the client is around 400Kb, and the client is just 1.5Mb.

Zopperoni is offline Zopperoni
Emperor

Dec 2000
time: 06:18
  Old Post 23-11-2004 17:53
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#51 Report this post to a moderator
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quote:
Originally posted by Asher
The restarting is normal, and you get your points for them the next time you return a successful packet:

Hey, cool

quote:
Originally posted by MrWhereItsAt
Silly people giving up because their computer's crunching gets nowhere within a few days/tries.

It's frustrating when other people get ten percent per hour while you don't even reach four percent in six hours.

Skanky Burns is offline Skanky Burns
Deity
Skanky Bastard Quartermaster
Aug 2001
time: 14:18
  Old Post 23-11-2004 17:56
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#52 Report this post to a moderator
Increase the size of your Attachments

I was at 0.8% after 8 hours. It gave up sometime after that, but I still got points for the processing time.

Skanky Burns is offline Skanky Burns
Deity
Skanky Bastard Quartermaster
Aug 2001
time: 14:18
  Old Post 23-11-2004 18:13
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#53 Report this post to a moderator
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quote:
Originally posted by Paddy the Scot
is this something that us dial-uper's can get into?


Its working fine on my dial-up connection at the moment. It takes a while between packets, but then I'm used to DSL speeds.

DrSpike is offline DrSpike
Deity
Enthusiastic member of Apolyton
Sep 2001
time: 05:18
  Old Post 23-11-2004 23:10
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#54 Report this post to a moderator
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* DrSpike points and laughs at dial-up users.

Unspeakable Horror is offline Unspeakable Horror
Emperor

Oct 1999
time: 02:18
  Old Post 24-11-2004 19:15
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#55 Report this post to a moderator
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quote:
Originally posted by Skanky Burns
I was at 0.8% after 8 hours. It gave up sometime after that, but I still got points for the processing time.


Thatīs because itīs doing a very complex protein, the same happened to me but now after 17hs itīs at 24%.

Skanky Burns is offline Skanky Burns
Deity
Skanky Bastard Quartermaster
Aug 2001
time: 14:18
  Old Post 25-11-2004 03:42
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#56 Report this post to a moderator
Lose 30 kilos (of popups)

* Skanky Burns takes the opportunity to announce that he now has unwired broadband!
My crappy dial-up modem is back into storage. Hooray for technology!

My next protein is much better, 10% after 1 hour.

DrSpike is offline DrSpike
Deity
Enthusiastic member of Apolyton
Sep 2001
time: 05:18
  Old Post 25-11-2004 04:42
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#57 Report this post to a moderator
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quote:
Originally posted by Skanky Burns

My crappy dial-up modem is back into storage. Hooray for technology!



That's more like it.

Skanky Burns is offline Skanky Burns
Deity
Skanky Bastard Quartermaster
Aug 2001
time: 14:18
  Old Post 25-11-2004 04:45
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#58 Report this post to a moderator
Remove this text

You can say that again.

Oerdin is offline Oerdin
King
of Internet Music.
Sep 2001
time: 21:18
  Old Post 25-11-2004 07:38
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How stable is this and does it end up sucking alot of your resources? I wouldn't mind installing it if I could cap the amount of CPU and bandwidth it was allowed.

Skanky Burns is offline Skanky Burns
Deity
Skanky Bastard Quartermaster
Aug 2001
time: 14:18
  Old Post 25-11-2004 07:49
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#60 Report this post to a moderator
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It only uses "spare" cycles and spare net connections. It uses all the spare cpu cycles when you allow it to run, but if you want your computer to run something else then the program does not run again until the cpu is once again unoccupied.

 
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